species:   Scscl
pid:       PID1668
parent:    Ssc-milR-144
paralog:   
locus:     NW_001820829.1:24169-24263
matures:   ['UGAUGCCGCCGGAUUCUGCAA', 'GCAACUCUGGUAUAGGUACAAC']
srr:       SRR12527895
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527895.cram NW_001820829.1:24169-24263

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

        ************************                              ***********************          
GGUUCAUCUAGCAACUCUGGUAUAGGUACAACUGUUGUAGUGGGAUCAAGGUAUACCCAGCAUUUGAUGCCGCCGGAUUCUGCAAUACGCUGAAC
.(((((.((((((..((((((...(((((((.(((((....((............))))))).))).))))))))))...)))..)).).)))))
----------------------------------------------------------------UGAUGCCGCCGGAUUCUGCAA---------- l=21 a=0 c
----------GCAACUCUGGUAUAGGUACAAC--------------------------------------------------------------- l=22 a=0 c*
----------------------------------------------------------------UGAUGCCGCCGGAUUCUGCAA---------- l=21 a=0 ma
----------GCAACUCUGGUAUAGGUACAAC--------------------------------------------------------------- l=22 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
